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USA-731101-Advertising Agencies and Consultants^^Advertising and Design Agencies^^Animal Health^^Billing Servic Κατάλογοι Εταιρεία
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Εταιρικά Νέα :
- Toward the estimation of the absolute quality of individual . . .
We demonstrate the ability of the newly introduced QMEAN Z-score to detect experimentally solved protein structures containing significant errors, as well as to evaluate theoretical protein models In a comprehensive QMEAN Z -score analysis of all experimental structures in the PDB, membrane proteins accumulate on one side of the score spectrum
- Prediction, validation, and analysis of protein structures: A . . .
PROVE tool calculates the Z-score, which measures the average magnitude of volume irregularities in the modeled structure The score is used to identify the specific regions within a protein model PROCHECK performs around eight evaluations in which the Ramachandran plot is included
- Protein single-model quality assessment by feature-based . . .
Qprob calculates the absolute error for each protein feature value against the true quality scores (i e GDT-TS scores) of protein structural models, and uses them to estimate its probability density distribution for quality assessment
- BIOINFORMATICS ORIGINAL PAPER Vol. 27 no. 3 2011, pages 343 . . .
We demonstrate the ability of the newly introduced QMEAN Z-score to detect experimentally solved protein structures containing significant errors, as well as to evaluate theoretical protein
- Protein structure verification: Introduction - Radboudumc
Summarizing: There is a "Z-score" and an "RMS-Z-score" A Z-score should be 0, and most of the time if it is negative it means worse than average, and positive better than average An RMS Z-score should be close to 1 0 Sometimes any deviation from 1 0 is "bad" (e g bond distances), in other cases one direction is "good" and the other is "bad"
- Comparative analysis of methods for evaluation of protein . . .
We carried out a comparative analysis of several popular model assessment methods (RMSD, TM-score, GDT, QCS, CAD-score, LDDT, SphereGrinder and RPF) to reveal their relative strengths and weaknesses
- Toward the estimation of the absolute quality of individual . . .
We demonstrate the ability of the newly introduced QMEAN Z-score to detect experimentally solved protein structures containing significant errors, as well as to evaluate theoretical protein models
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